RNA-seq data for detecting reliable SNPs & genotypes in livestock species: interest for coding variant characterization and cis-regulation analysis by allele-specific expression ! - Institut Agro Rennes-Angers Accéder directement au contenu
Communication Dans Un Congrès Année : 2022

RNA-seq data for detecting reliable SNPs & genotypes in livestock species: interest for coding variant characterization and cis-regulation analysis by allele-specific expression !

Olivier Bouchez
Sophie Leroux
Behnam Abasht
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Thierry Burlot
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David Gourichon

Résumé

Context 2 • For detecting polymorphisms in the whole genome of a population, DNA-seq data analyzed by the bioinformatics GATK tool is the standard approach. • DNA-seq data are expensive to generate and to store, because these data are large
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Dates et versions

hal-04258396 , version 1 (26-10-2023)

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  • HAL Id : hal-04258396 , version 1

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Frédéric Jehl, Fabien Degalez, Maria Bernard, Frédéric Lecerf, Laetitia Lagoutte, et al.. RNA-seq data for detecting reliable SNPs & genotypes in livestock species: interest for coding variant characterization and cis-regulation analysis by allele-specific expression !. World Poultry Congress (WPC) 2022, Aug 2022, Paris, France. ⟨hal-04258396⟩
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